Other publications

Alonso-López D; Gutiérrez MA; Lopes KP; Prieto C; Santamaría R; De Las Rivas J, 2016. APID interactomes: providing proteome-based interactomes with controlled quality for multiple species and derived networks.  Nucleic Acids Res 44(W1):W529-35

Infante J; Prieto C; Sierra M; Sánchez-Juan P; González-Aramburu I; Sánchez-Quintana C; Berciano J; Combarros O; Sainz J, 2016. Comparative blood transcriptome analysis in idiopathic and LRRK2 G2019S-associated Parkinson's disease.  Neurobiol Aging 38:214.e1-5

Prieto C, 2016. Characterization of Nonribosomal Peptide Synthetases with NRPSsp.  Methods Mol Biol 1401:273-8

Infante J; Prieto C; Sierra M; Sánchez-Juan P; González-Aramburu I; Sánchez-Quintana C; Berciano J; Combarros O; Sainz J, 2015. Identification of candidate genes for Parkinson's disease through blood transcriptome analysis in LRRK2-G2019S carriers, idiopathic cases, and controls.  Neurobiol Aging 36(2):1105-9

Domínguez-Santos R; García-Estrada C; Kosalková K; Prieto C; Santamarta I; Martín JF, 2015. PcFKH1, a novel regulatory factor from the forkhead family, controls the biosynthesis of penicillin in Penicillium chrysogenum.  Biochimie 115:162-76

Chira C; Sedano J; Camara M; Prieto C; Villar JR; Corchado E, 2014. A cluster merging method for time series microarray with production values.  Int J Neural Syst 24(6):1450018

Crespo-Facorro B; Prieto C; Sainz J, 2014. Schizophrenia gene expression profile reverted to normal levels by antipsychotics.  Int J Neuropsychopharmacol 18.

Prada CF; Alvarez-Velilla R; Balaña-Fouce R; Prieto C; Calvo-Álvarez E; Escudero-Martínez JM; Requena JM; Ordóñez C; Desideri A; Pérez-Pertejo Y; Reguera RM, 2013. Gimatecan and other camptothecin derivatives poison Leishmania DNA-topoisomerase IB leading to a strong leishmanicidal effect.  Biochem Pharmacol 85(10):1433-40

Barreiro C; Prieto C; Sola-Landa A; Solera E; Martínez-Castro M; Pérez-Redondo R; García-Estrada C; Aparicio JF; Fernández-Martínez LT; Santos-Aberturas J; Salehi-Najafabadi Z; Rodríguez-García A; Tauch A; Martín JF, 2012. Draft genome of Streptomyces tsukubaensis NRRL 18488, the producer of the clinically important immunosuppressant tacrolimus (FK506).  J Bacteriol 194(14):3756-7

Prieto C; García-Estrada C; Lorenzana D; Martín JF, 2012. NRPSsp: non-ribosomal peptide synthase substrate predictor.  Bioinformatics 28(3):426-7

De Las Rivas J; Prieto C, 2012. Protein interactions: mapping interactome networks to support drug target discovery and selection.  Methods Mol Biol 910:279-96

Domínguez-Santos R; Martín JF; Kosalková K; Prieto C; Ullán RV; García-Estrada C, 2012. The regulatory factor PcRFX1 controls the expression of the three genes of β-lactam biosynthesis in Penicillium chrysogenum.  Fungal Genet Biol 49(11):866-81

Prada CF; Alvarez-Velilla R; Diaz-González R; Prieto C; Pérez-Pertejo Y; Balaña-Fouce R; Reguera RM, 2012. A pentapeptide signature motif plays a pivotal role in Leishmania DNA topoisomerase IB activity and camptothecin sensitivity.  Biochim Biophys Acta 1820(12):2062-71

Martín JF; Sola-Landa A; Santos-Beneit F; Fernández-Martínez LT; Prieto C; Rodríguez-García A, 2011. Cross-talk of global nutritional regulators in the control of primary and secondary metabolism in Streptomyces.  Microb Biotechnol 4(2):165-74

Souiai O; Becker E; Prieto C; Benkahla A; De las Rivas J; Brun C, 2011. Functional integrative levels in the human interactome recapitulate organ organization.  PLoS One 6(7):e22051

Aranda B; Blankenburg H; Kerrien S; Brinkman FS; Ceol A; Chautard E; Dana JM; De Las Rivas J; Dumousseau M; Galeota E; Gaulton A; Goll J; Hancock RE; Isserlin R; Jimenez RC; Kerssemakers J; Khadake J; Lynn DJ; Michaut M; O'Kelly G; Ono K; Orchard S; Prieto C; Razick S; Rigina O; Salwinski L; Simonovic M; Velankar S; Winter A; Wu G; Bader GD; Cesareni G; Donaldson IM; Eisenberg D; Kleywegt GJ; Overington J; Ricard-Blum S; Tyers M; Albrecht M; Hermjakob H, 2011. PSICQUIC and PSISCORE: accessing and scoring molecular interactions.  Nat Methods 8(7):528-9

Prieto C; De Las Rivas J, 2010. Structural domain-domain interactions: assessment and comparison with protein-protein interaction data to improve the interactome.  Proteins 78(1):109-17

Prieto C; Risueño A; Fontanillo C; De las Rivas J, 2008. Human gene coexpression landscape: confident network derived from tissue transcriptomic profiles.  PLoS One 3(12):e3911

Hernandez-Toro J; Prieto C; De las Rivas J, 2007. APID2NET: unified interactome graphic analyzer.  Bioinformatics 23(18):2495-7

Orchard S; Salwinski L; Kerrien S; Montecchi-Palazzi L; Oesterheld M; Stümpflen V; Ceol A; Chatr-aryamontri A; Armstrong J; Woollard P; Salama JJ; Moore S; Wojcik J; Bader GD; Vidal M; Cusick ME; Gerstein M; Gavin AC; Superti-Furga G; Greenblatt J; Bader J; Uetz P; Tyers M; Legrain P; Fields S; Mulder N; Gilson M; Niepmann M; Burgoon L; De Las Rivas J; Prieto C; Perreau VM; Hogue C; Mewes HW; Apweiler R; Xenarios I; Eisenberg D; Cesareni G; Hermjakob H, 2007. The minimum information required for reporting a molecular interaction experiment (MIMIx).  Nat Biotechnol 25(8):894-8

Prieto C; Rivas MJ; Sánchez JM; López-Fidalgo J; De Las Rivas J, 2006. Algorithm to find gene expression profiles of deregulation and identify families of disease-altered genes.  Bioinformatics 22(9):1103-10

Prieto C; De Las Rivas J, 2006. APID: Agile Protein Interaction DataAnalyzer.  Nucleic Acids Res 34(Web Server issue):W298-302

Publication list retrieved from NCBI.