2016. APID interactomes: providing proteome-based interactomes with controlled quality for multiple species and derived networks.  Nucleic Acids Res 44(W1):W529-35
,2016. Comparative blood transcriptome analysis in idiopathic and LRRK2 G2019S-associated Parkinson's disease.  Neurobiol Aging 38:214.e1-5
,2016. Characterization of Nonribosomal Peptide Synthetases with NRPSsp.  Methods Mol Biol 1401:273-8
,2015. Identification of candidate genes for Parkinson's disease through blood transcriptome analysis in LRRK2-G2019S carriers, idiopathic cases, and controls.  Neurobiol Aging 36(2):1105-9
,2015. PcFKH1, a novel regulatory factor from the forkhead family, controls the biosynthesis of penicillin in Penicillium chrysogenum.  Biochimie 115:162-76
,2014. A cluster merging method for time series microarray with production values.  Int J Neural Syst 24(6):1450018
,2014. Schizophrenia gene expression profile reverted to normal levels by antipsychotics.  Int J Neuropsychopharmacol 18.
,2013. Gimatecan and other camptothecin derivatives poison Leishmania DNA-topoisomerase IB leading to a strong leishmanicidal effect.  Biochem Pharmacol 85(10):1433-40
,2012. Draft genome of Streptomyces tsukubaensis NRRL 18488, the producer of the clinically important immunosuppressant tacrolimus (FK506).  J Bacteriol 194(14):3756-7
,2012. NRPSsp: non-ribosomal peptide synthase substrate predictor.  Bioinformatics 28(3):426-7
,2012. Protein interactions: mapping interactome networks to support drug target discovery and selection.  Methods Mol Biol 910:279-96
,2012. The regulatory factor PcRFX1 controls the expression of the three genes of β-lactam biosynthesis in Penicillium chrysogenum.  Fungal Genet Biol 49(11):866-81
,2012. A pentapeptide signature motif plays a pivotal role in Leishmania DNA topoisomerase IB activity and camptothecin sensitivity.  Biochim Biophys Acta 1820(12):2062-71
,2011. Cross-talk of global nutritional regulators in the control of primary and secondary metabolism in Streptomyces.  Microb Biotechnol 4(2):165-74
,2011. Functional integrative levels in the human interactome recapitulate organ organization.  PLoS One 6(7):e22051
,2011. PSICQUIC and PSISCORE: accessing and scoring molecular interactions.  Nat Methods 8(7):528-9
,2010. Structural domain-domain interactions: assessment and comparison with protein-protein interaction data to improve the interactome.  Proteins 78(1):109-17
,2008. Human gene coexpression landscape: confident network derived from tissue transcriptomic profiles.  PLoS One 3(12):e3911
,2007. APID2NET: unified interactome graphic analyzer.  Bioinformatics 23(18):2495-7
,2007. The minimum information required for reporting a molecular interaction experiment (MIMIx).  Nat Biotechnol 25(8):894-8
,2006. Algorithm to find gene expression profiles of deregulation and identify families of disease-altered genes.  Bioinformatics 22(9):1103-10
,2006. APID: Agile Protein Interaction DataAnalyzer.  Nucleic Acids Res 34(Web Server issue):W298-302
,Publication list retrieved from NCBI.